4QTO
1.65 Angstrom resolution crystal structure of betaine aldehyde dehydrogenase (betB) from Staphylococcus aureus with BME-modified Cys289 and PEG molecule in active site
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-16 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97856 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 224.249, 102.474, 118.178 |
Unit cell angles | 90.00, 104.45, 90.00 |
Refinement procedure
Resolution | 29.710 - 1.650 |
R-factor | 0.13689 |
Rwork | 0.136 |
R-free | 0.15554 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4mpb |
RMSD bond length | 0.011 |
RMSD bond angle | 1.643 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.680 |
High resolution limit [Å] | 1.650 | 1.650 |
Rmerge | 0.082 | 0.631 |
Number of reflections | 307248 | |
<I/σ(I)> | 16.7 | 2.5 |
Completeness [%] | 98.6 | 97.5 |
Redundancy | 4.3 | 4.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 3.5 | 295 | 7 mg/mL protein in 10 mM betaine (not observed in structure), 10 mM Tris-HCl, pH 8.3, 500 mM sodium chloride, 5 mM BME, crystallization: The Classics II Suite D4 (40): 0.1 M citric acid, pH 3.5, 25% w/v PEG3350, cryoprotectant: well solution, VAPOR DIFFUSION, SITTING DROP, temperature 295K |