4QSP
Structure of the bromodomain of human ATPase family AAA domain-containing protein 2 (ATAD2) in complex with acetyl-lysine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2011-08-12 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 79.730, 79.730, 138.660 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.310 - 1.600 |
R-factor | 0.16676 |
Rwork | 0.165 |
R-free | 0.19403 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdb id: 3DAI |
RMSD bond length | 0.016 |
RMSD bond angle | 1.569 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.870 | 1.690 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.073 | 0.439 |
Number of reflections | 34683 | |
<I/σ(I)> | 2 | 3.7 |
Completeness [%] | 99.0 | 93.9 |
Redundancy | 7.6 | 5.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 277.15 | apo crystals grew in 1.8-2.2 M ammonium sulphate, 0.1 M Bis-Tris, pH 5.5-6.5. Soaking performed in 28-32% PEG 3350, 50 mM bis-tris pH 5.5, 50 mM ammonium phosphate and 20% ethylene glycol, VAPOR DIFFUSION, SITTING DROP, temperature 277.15K |