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4QLP

Atomic structure of tuberculosis necrotizing toxin (TNT) complexed with its immunity factor IFT

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X6A
Synchrotron siteNSLS
BeamlineX6A
Temperature [K]100
Detector technologyCCD
Collection date2014-04-09
DetectorADSC QUANTUM 270r
Wavelength(s)0.972
Spacegroup nameP 21 21 21
Unit cell lengths70.618, 86.295, 62.691
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.598 - 1.100
R-factor0.1287
Rwork0.129
R-free0.14300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4o6g
RMSD bond length0.010
RMSD bond angle1.402
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: dev_1696))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]20.0001.2401.140
High resolution limit [Å]1.1001.1801.100
Number of reflections141169
<I/σ(I)>29.59.884.52
Completeness [%]90.895.455.5
Redundancy12.612.18.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.22980.2 M ammonium formate, 24% (w/v) PEG 3,350, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 298K
1VAPOR DIFFUSION, HANGING DROP6.22980.2 M ammonium formate, 24% (w/v) PEG 3,350, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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PDB entries from 2024-06-26

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