4QLP
Atomic structure of tuberculosis necrotizing toxin (TNT) complexed with its immunity factor IFT
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X6A |
Synchrotron site | NSLS |
Beamline | X6A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-04-09 |
Detector | ADSC QUANTUM 270r |
Wavelength(s) | 0.972 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 70.618, 86.295, 62.691 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.598 - 1.100 |
R-factor | 0.1287 |
Rwork | 0.129 |
R-free | 0.14300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4o6g |
RMSD bond length | 0.010 |
RMSD bond angle | 1.402 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: dev_1696)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.240 | 1.140 |
High resolution limit [Å] | 1.100 | 1.180 | 1.100 |
Number of reflections | 141169 | ||
<I/σ(I)> | 29.5 | 9.88 | 4.52 |
Completeness [%] | 90.8 | 95.4 | 55.5 |
Redundancy | 12.6 | 12.1 | 8.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 298 | 0.2 M ammonium formate, 24% (w/v) PEG 3,350, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 298 | 0.2 M ammonium formate, 24% (w/v) PEG 3,350, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 298K |