Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4Q8H

Structure of the Saccharomyces cerevisiae PAN2 pseudoubiquitin-hydrolase-RNase module

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-4
Synchrotron siteESRF
BeamlineID14-4
Temperature [K]100
Detector technologyCCD
Collection date2013-07-30
DetectorADSC QUANTUM 315r
Wavelength(s)0.939080
Spacegroup nameI 2 2 2
Unit cell lengths91.712, 115.505, 257.449
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.013 - 3.100
R-factor0.2406
Rwork0.239
R-free0.27530
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB ENTRIES 1WLJ AND 4Q8G
RMSD bond length0.004
RMSD bond angle0.872
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareAutoSol
Refinement softwarePHENIX ((phenix.refine: dev_1647))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.0133.320
High resolution limit [Å]3.1003.100
Rmerge0.1332.488
Number of reflections25287
<I/σ(I)>9.60.7
Completeness [%]100.0100
Redundancy5.35.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.5293100 mM sodium acetate, pH 5.5, 10% v/v PEG200, VAPOR DIFFUSION, SITTING DROP, temperature 293K

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon