Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4Q6Q

Structural analysis of the Zn-form II of Helicobacter pylori Csd4, a D,L-carboxypeptidase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 7A (6B, 6C1)
Synchrotron sitePAL/PLS
Beamline7A (6B, 6C1)
Temperature [K]100
Detector technologyCCD
Collection date2013-04-03
DetectorADSC QUANTUM 270
Wavelength(s)1.2823
Spacegroup nameP 21 21 21
Unit cell lengths53.314, 66.928, 144.806
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 2.400
R-factor0.16843
Rwork0.167
R-free0.20469
Structure solution methodSAD
RMSD bond length0.009
RMSD bond angle1.338
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareAutoSol
Refinement softwareREFMAC (5.8.0049)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.440
High resolution limit [Å]2.4002.400
Number of reflections38851
Completeness [%]99.899.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52960.2M calcium chloride, 0.1M HEPES-NaOH, 25%(w/v) polyethylene glycol 3350, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 296K

225399

PDB entries from 2024-09-25

PDB statisticsPDBj update infoContact PDBjnumon