4Q42
Crystal structure of Schistosoma mansoni arginase in complex with L-ornithine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-10-24 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.075 |
Spacegroup name | P 21 3 |
Unit cell lengths | 178.447, 178.447, 178.447 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.492 - 2.051 |
R-factor | 0.1756 |
Rwork | 0.174 |
R-free | 0.20770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4q3p |
RMSD bond length | 0.006 |
RMSD bond angle | 0.934 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.5_2)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.120 |
High resolution limit [Å] | 2.050 | 4.420 | 2.050 |
Rmerge | 0.130 | 0.063 | 0.790 |
Number of reflections | 118020 | ||
<I/σ(I)> | 14.1 | 31.3 | 3.8 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 12.4 | 12.1 | 12.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | crystal soaked in 50 mM L-ornithine, 0.1 M imidazole, pH 7.0, 14% w/v PEG20000 for one day, VAPOR DIFFUSION, SITTING DROP, temperature 277K |