4Q2B
The crystal structure of an endo-1,4-D-glucanase from Pseudomonas putida KT2440
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-10-09 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97938 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 126.938, 129.189, 165.115 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.780 - 2.120 |
R-factor | 0.1648 |
Rwork | 0.163 |
R-free | 0.19810 |
Structure solution method | SAD |
RMSD bond length | 0.007 |
RMSD bond angle | 1.053 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | SHELXD |
Refinement software | PHENIX ((phenix.refine: 1.8.2_1309)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.000 | 2.160 |
High resolution limit [Å] | 2.120 | 2.120 |
Rmerge | 0.081 | 0.685 |
Number of reflections | 153814 | |
<I/σ(I)> | 29.9 | 2.64 |
Completeness [%] | 99.9 | 100 |
Redundancy | 6 | 5.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 289 | 0.09M malonic acid, 0.0125M ammonium citratic tribasic, 0.006M succinic acid, 0.015M DL-malic acid, 0.01M sodium acetate, 0.025M sodium formate, 0.008M ammonium tartrate, 0.1M HEPES:NaOH, 10% (w/v) PEG MME 5000, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 289K |