4PYT
Crystal structure of a MurB family EP-UDP-N-acetylglucosamine reductase
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-F |
| Synchrotron site | APS |
| Beamline | 21-ID-F |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2011-10-10 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 0.97872 |
| Spacegroup name | H 3 2 |
| Unit cell lengths | 106.786, 106.786, 201.085 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 44.167 - 1.853 |
| R-factor | 0.205 |
| Rwork | 0.204 |
| R-free | 0.22710 |
| Structure solution method | PDB ENTRY 3TX1 |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.417 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 10000.000 | 10000.000 | 1.880 |
| High resolution limit [Å] | 1.850 | 5.020 | 1.850 |
| Rmerge | 0.092 | 0.065 | 0.860 |
| Number of reflections | 37611 | ||
| <I/σ(I)> | 10.2 | ||
| Completeness [%] | 99.8 | 99.2 | 98.4 |
| Redundancy | 6.9 | 7.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 277 | Final crystallization conditions contained 1.5 micro l reservoir solution (0.5M MgCl2, 0.1M Tris pH 8.5 and 20% PEG 8000) and 1.5 micro L of 8.0 mg/ml LucY in 150mM NaCl, 50mM Tris pH 7.5.. Crystals were cryoprotected by transferring into Mitegen s LV CryoOil (MiTeGen, LLC) prior to mounting and were flash-frozen in liquid nitrogen. , VAPOR DIFFUSION, HANGING DROP, temperature 277K |






