4PWZ
Crystal structure of TolB protein from Yersinia pestis CO92
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-11-17 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97926 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 52.440, 95.813, 80.514 |
Unit cell angles | 90.00, 95.39, 90.00 |
Refinement procedure
Resolution | 30.740 - 1.732 |
R-factor | 0.169 |
Rwork | 0.167 |
R-free | 0.19800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1c5k |
RMSD bond length | 0.010 |
RMSD bond angle | 1.287 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | HKL-3000 |
Refinement software | PHENIX ((phenix.refine: dev_1593)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.750 |
High resolution limit [Å] | 1.730 | 1.730 |
Number of reflections | 81921 | |
<I/σ(I)> | 13.2 | 1.9 |
Completeness [%] | 99.2 | 86.5 |
Redundancy | 4.3 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 289 | 0.1 M MES, pH 6.5, 10% PEG5000 MME, 12% 1-propanol, VAPOR DIFFUSION, SITTING DROP, temperature 289K |