4PLX
Crystal structure of the triple-helical stability element at the 3' end of MALAT1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-12-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 162.820, 162.820, 65.930 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.200 - 3.100 |
R-factor | 0.222 |
Rwork | 0.220 |
R-free | 0.25500 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.026 |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.180 |
High resolution limit [Å] | 3.100 | 3.100 |
Number of reflections | 17565 | |
<I/σ(I)> | 17.2 | 1.28 |
Completeness [%] | 99.7 | 99.8 |
Redundancy | 11.2 | 11.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | Folded RNA was combined with an equal volume of the reservoir solution (50 mM sodium cacodylate pH 6.5, 18 mM magnesium chloride, 2.5 mM spermine and 9% isopropanol) |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | Folded RNA was combined with an equal volume of the reservoir solution (50 mM sodium cacodylate pH 6.5, 18 mM magnesium chloride, 2.5 mM spermine and 9% isopropanol) |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | Folded RNA was combined with an equal volume of the reservoir solution (50 mM sodium cacodylate pH 6.5, 18 mM magnesium chloride, 2.5 mM spermine and 9% isopropanol) |