4PGP
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM DESULFOVIBRIO ALASKENSIS G20 (Dde_0634, TARGET EFI-510120) WITH BOUND 3-INDOLE ACETIC ACID
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-03-21 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.286, 145.536, 97.919 |
Unit cell angles | 90.00, 92.19, 90.00 |
Refinement procedure
Resolution | 35.742 - 2.250 |
R-factor | 0.2054 |
Rwork | 0.202 |
R-free | 0.26180 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.014 |
RMSD bond angle | 1.438 |
Data scaling software | Aimless (0.1.27) |
Refinement software | PHENIX ((phenix.refine: 1.8.1_1168)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.460 | 43.460 | 2.310 |
High resolution limit [Å] | 2.250 | 10.310 | 2.250 |
Rmerge | 0.153 | 0.043 | 1.030 |
Rpim | 0.099 | 0.028 | 0.675 |
Total number of observations | 190054 | 1814 | 13031 |
Number of reflections | 61615 | ||
<I/σ(I)> | 3.3 | 7.8 | 1 |
Completeness [%] | 92.5 | 79.7 | 92 |
Redundancy | 3.1 | 3.2 | 3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 298 | Protein (68.0 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT, 10 mM 3-INDOLE ACETIC ACID); Reservoir (0.2 M di-Ammonium Hydrogen Citrate pH 5.0, 20 %(w/v) PEG 3350); Cryoprotection (80% Reservoir + 20% Ethylene Glycol) |