4PG5
Crystal structure of S. aureus Homoserine Dehydrogenase at pH6.5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-07-29 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.95372 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 72.480, 115.430, 118.230 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.500 - 2.200 |
R-factor | 0.203 |
Rwork | 0.201 |
R-free | 0.23800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3do5 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.362 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 118.230 | 38.477 | 2.320 |
High resolution limit [Å] | 2.200 | 6.960 | 2.200 |
Rmerge | 0.023 | 0.492 | |
Rpim | 0.009 | 0.177 | |
Total number of observations | 13906 | 62544 | |
Number of reflections | 51107 | ||
<I/σ(I)> | 20.7 | 48 | 4.8 |
Completeness [%] | 100.0 | 99.3 | 100 |
Redundancy | 8.6 | 7.8 | 8.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.2M Magnesium acetate, 16% PEG3350, 0.1M Sodium Cacodylate, pH6.5, 5% Glycerol |