4PDY
Crystal structure of aminoglycoside phosphotransferase from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-08-18 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97935 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 37.522, 51.955, 145.851 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.860 - 1.350 |
R-factor | 0.133 |
Rwork | 0.131 |
R-free | 0.17360 |
Structure solution method | SAD |
RMSD bond length | 0.009 |
RMSD bond angle | 1.290 |
Data scaling software | SCALEPACK |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.360 |
High resolution limit [Å] | 1.350 | 4.620 | 1.350 |
Rmerge | 0.067 | 0.045 | 0.535 |
Total number of observations | 436171 | ||
Number of reflections | 63586 | ||
<I/σ(I)> | 10.4 | ||
Completeness [%] | 99.7 | 95.9 | 96.5 |
Redundancy | 6.9 | 6.3 | 4.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 287 | 0.5M potassium thiocyanate, 1.0M sodium acetate |