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4PDO

Structure of Ephrin type-A receptor 2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-5A
Synchrotron sitePhoton Factory
BeamlineBL-5A
Temperature [K]100
Detector technologyCCD
Collection date2013-11-23
DetectorADSC QUANTUM 315r
Wavelength(s)1.000
Spacegroup nameP 32
Unit cell lengths92.461, 92.461, 75.836
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution14.902 - 2.104
R-factor0.1615
Rwork0.160
R-free0.18380
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1mqb
RMSD bond length0.007
RMSD bond angle1.016
Data scaling softwareSCALEPACK
Refinement softwarePHENIX (1.8.2_1309)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]15.00015.0002.140
High resolution limit [Å]2.1005.6002.100
Rmerge0.0860.0510.444
Total number of observations197356
Number of reflections41909
<I/σ(I)>9.3
Completeness [%]99.897.6100
Redundancy4.745.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52930.8 M Na/K L(+)-tartrate, 0.1 M Tris-Cl pH 8.5, 1% (w/v) PEGMME 5000

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