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4PD0

1.7 A resolution structure of gephyrin's E-domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID29
Synchrotron siteESRF
BeamlineID29
Temperature [K]100
Detector technologyPIXEL
Collection date2012-12-01
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9198
Spacegroup nameI 2 2 2
Unit cell lengths87.655, 100.008, 113.695
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.828 - 1.700
R-factor0.1618
Rwork0.161
R-free0.18420
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2fu3
RMSD bond length0.011
RMSD bond angle1.322
Data scaling softwareAimless
Refinement softwarePHENIX ((phenix.refine: 1.8_1069))
Data quality characteristics
 Overall
Low resolution limit [Å]43.830
High resolution limit [Å]1.700
Rmerge0.105
Number of reflections55179
<I/σ(I)>15
Completeness [%]100.0
Redundancy13
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.52930.1 M sodium-citrate, pH 4.5, 28-34% 2-methyl-2,4-pentanediol

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