4PC9
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM ROSENBACTER DENITRIFICANS OCh 114 (RD1_1052, TARGET EFI-510238) WITH BOUND D-MANNONATE
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-04-02 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 52.365, 73.339, 75.752 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 23.875 - 1.300 |
R-factor | 0.1356 |
Rwork | 0.135 |
R-free | 0.14840 |
Structure solution method | SAD |
RMSD bond length | 0.012 |
RMSD bond angle | 1.213 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 75.750 | 1.320 |
High resolution limit [Å] | 1.300 | 1.300 |
Rmerge | 0.117 | 0.918 |
Number of reflections | 72237 | |
<I/σ(I)> | 17.8 | 4.1 |
Completeness [%] | 99.7 | 99.3 |
Redundancy | 14.1 | 13.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | Protein (42.4 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT, 10 mM D-MANNONATE); Reservoir (0.1 M Tris pH 8.5, 2.4 M di-Ammonium Phosphate); Cryoprotection (80% Reservoir + 20% diethylene glycol) |