Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4P84

Structure of engineered PyrR protein (VIOLET PyrR)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyPIXEL
Collection date2013-06-23
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9795
Spacegroup nameI 1 2 1
Unit cell lengths53.770, 56.400, 60.165
Unit cell angles90.00, 97.32, 90.00
Refinement procedure
Resolution42.550 - 2.200
R-factor0.20767
Rwork0.205
R-free0.26950
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1a3c
RMSD bond length0.013
RMSD bond angle1.768
Data reduction softwareMOSFLM
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0069)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.5502.270
High resolution limit [Å]2.2002.200
Rmerge0.382
Number of reflections8535
<I/σ(I)>3.12.2
Completeness [%]98.498
Redundancy2.62.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP729330% PEG-600, 10% glycerol, 0.1M Tris pH 7.0, 0.5 M (NH4)2SO4

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon