4P1L
Crystal structure of a trap periplasmic solute binding protein from chromohalobacter salexigens dsm 3043 (csal_2479), target EFI-510085, with bound d-glucuronate, spg i213
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU300 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2014-02-21 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.54 |
Spacegroup name | I 21 3 |
Unit cell lengths | 158.120, 158.120, 158.120 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.357 - 1.700 |
R-factor | 0.1447 |
Rwork | 0.143 |
R-free | 0.18110 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.228 |
Data scaling software | SCALA (3.3.20) |
Refinement software | PHENIX ((phenix.refine: 1.8.1_1168)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 111.808 | 42.259 | 1.790 |
High resolution limit [Å] | 1.700 | 5.380 | 1.700 |
Rmerge | 0.033 | 0.630 | |
Rmeas | 0.106 | ||
Rpim | 0.023 | 0.007 | 0.213 |
Total number of observations | 1370709 | 50830 | 88714 |
Number of reflections | 71263 | ||
<I/σ(I)> | 20.5 | 50.5 | 3 |
Completeness [%] | 99.1 | 99.8 | 93.9 |
Redundancy | 19.2 | 21.3 | 9.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 10 | 298 | Protein (35.6 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT, 10 mM D-Glucuronate); Reservoir (0.2M Lithium Sulfate 0.1 M CAPS pH 10.5 2.0 M Ammonium Sulfate ); Cryoprotection (20% glycerol + Reservoir |