4P1E
Crystal structure of a trap periplasmic solute binding protein from escherichia fergusonii (efer_1530), target EFI-510119, apo open structure, phased with iodide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU300 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2014-02-20 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.54 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 67.820, 67.820, 156.351 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.983 - 1.900 |
R-factor | 0.1984 |
Rwork | 0.196 |
R-free | 0.23880 |
Structure solution method | SAD |
RMSD bond length | 0.013 |
RMSD bond angle | 1.358 |
Data scaling software | SCALA (3.3.20) |
Refinement software | PHENIX ((phenix.refine: 1.8.1_1168)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 58.734 | 46.958 | 2.000 |
High resolution limit [Å] | 1.900 | 6.010 | 1.900 |
Rmerge | 0.031 | 0.577 | |
Rmeas | 0.176 | ||
Rpim | 0.048 | 0.025 | 0.249 |
Total number of observations | 412915 | 15422 | 27505 |
Number of reflections | 32768 | ||
<I/σ(I)> | 14 | 31.6 | 2.8 |
Completeness [%] | 97.3 | 99.8 | 83.6 |
Redundancy | 12.6 | 12.7 | 6.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | Protein (34.8 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT); Reservoir (60 %(v/v) Tacsimate pH 7.0); Soak (Three minutes in 1 M NaI + Reservoir); Cryoprotection (20% glycerol + Reservoir |