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4P0D

The T6 backbone pilin of serotype M6 Streptococcus pyogenes has a modular three-domain structure decorated with variable loops and extensions

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX1
Synchrotron siteAustralian Synchrotron
BeamlineMX1
Temperature [K]110
Detector technologyCCD
Collection date2013-03-20
DetectorADSC QUANTUM 210r
Wavelength(s)0.9537
Spacegroup nameP 63
Unit cell lengths104.240, 104.240, 84.220
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution50.000 - 1.900
R-factor0.2111
Rwork0.209
R-free0.24990
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4k8w
RMSD bond length0.008
RMSD bond angle1.256
Data reduction softwareXDS (0.2.8)
Data scaling softwareSCALA (2.5.2)
Phasing softwarePHASER (2.5.2)
Refinement softwareREFMAC (5.8.0049)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]24.48024.4801.940
High resolution limit [Å]1.9008.9101.900
Rmerge0.1520.0510.939
Rpim0.0360.0120.229
Total number of observations665673773327669
Number of reflections36565
<I/σ(I)>16.644.33.8
Completeness [%]89.195.257.9
Redundancy18.219.117.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.22912.2 M NaKPO4 pH 6.4, 2 % PEG 400, 0.1 M imidazole, 20 mM Imidazole

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PDB entries from 2024-07-17

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