4OQQ
Structure of the effector-binding domain of deoxyribonucleoside regulator DeoR from Bacillus subtilis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-12-15 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.9184 |
Spacegroup name | P 32 |
Unit cell lengths | 63.081, 63.081, 150.129 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 27.310 - 1.800 |
R-factor | 0.19455 |
Rwork | 0.193 |
R-free | 0.22756 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4oqp |
RMSD bond length | 0.012 |
RMSD bond angle | 1.439 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.048 | 0.179 |
Number of reflections | 57887 | |
<I/σ(I)> | 2.9 | |
Completeness [%] | 93.1 | 53.3 |
Redundancy | 3.8 | 2.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 291 | 0.1 M Bicine, 20% (w/v) PEG 6000; 12.5 mg/mL protein in 20 mM trisodium citrate pH 7.0, 150 mM NaCl, 0.02% (v/v) 2-mercaptoethanol; protein:reservoir 1:2, VAPOR DIFFUSION, HANGING DROP, temperature 291K |