4OOP
Arabidopsis thaliana dUTPase with with magnesium and alpha,beta-imido-dUTP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 14-BM-C |
Synchrotron site | APS |
Beamline | 14-BM-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-10-21 |
Detector | ADSC QUANTUM 315 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 70.089, 70.680, 75.064 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.970 - 1.500 |
R-factor | 0.175 |
Rwork | 0.174 |
R-free | 0.20900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB ID 4OOQ |
RMSD bond length | 0.007 |
RMSD bond angle | 1.164 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: dev_1606)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 31.970 | 1.550 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.067 | 0.320 |
Number of reflections | 59499 | |
<I/σ(I)> | 46.4 | 7.7 |
Completeness [%] | 98.5 | 97.3 |
Redundancy | 6.1 | 6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 9 | 298 | 2 M ammonium sulfate, 0.1 M Tris-HCl, 0.02 M Taurine, 5mM dUpNHpp,5mM Magnesium, pH 9, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K |