4OBE
Crystal Structure of GDP-bound Human KRas
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-12-03 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97926 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 66.147, 42.096, 114.393 |
Unit cell angles | 90.00, 105.32, 90.00 |
Refinement procedure
Resolution | 22.065 - 1.240 |
R-factor | 0.1572 |
Rwork | 0.157 |
R-free | 0.16860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4epv |
RMSD bond length | 0.010 |
RMSD bond angle | 1.427 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: dev_1523)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.260 |
High resolution limit [Å] | 1.240 | 3.370 | 1.240 |
Rmerge | 0.049 | 0.029 | 0.395 |
Number of reflections | 81203 | ||
<I/σ(I)> | 2.06 | 56.6 | 2.1 |
Completeness [%] | 100.0 | 96.5 | 94.1 |
Redundancy | 4.3 | 4.7 | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 0.2M Sodium Acetate pH4.5, 0.1M Tris pH 8.5, 26% PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 293K |