4OB4
Structure of the S. venezulae BldD DNA-binding domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-03-12 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 79.970, 79.970, 117.400 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 69.256 - 2.800 |
R-factor | 0.2363 |
Rwork | 0.230 |
R-free | 0.29550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ewt |
RMSD bond length | 0.010 |
RMSD bond angle | 1.165 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.6.4_486)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 69.256 |
High resolution limit [Å] | 2.800 |
Rmerge | 0.113 |
Number of reflections | 5897 |
<I/σ(I)> | 12.4 |
Completeness [%] | 99.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 30% PEG 400, 0.1 M MgCl2, Hepes, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |