4O96
2.60 Angstrom resolution crystal structure of a protein kinase domain of type III effector NleH2 (ECs1814) from Escherichia coli O157:H7 str. Sakai
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-08-18 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.0000 |
Spacegroup name | P 4 21 2 |
Unit cell lengths | 147.252, 147.252, 83.050 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.610 - 2.600 |
R-factor | 0.21038 |
Rwork | 0.208 |
R-free | 0.25288 |
Structure solution method | SAD |
RMSD bond length | 0.013 |
RMSD bond angle | 1.669 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.690 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.106 | 0.738 |
Number of reflections | 28323 | |
<I/σ(I)> | 14.5 | 2.1 |
Completeness [%] | 99.2 | 98.7 |
Redundancy | 6.6 | 6.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 295 | Native protein at 10 mg/mL crystallization: 1.6 M NH4 sulphate, 100 mM SPG buffer pH 7.0, 12% glycerol and 1% PEG 2000 MME. cryo conditions: Paratone-N oil , VAPOR DIFFUSION, HANGING DROP, temperature 295K |
2 |