4O5J
Crystal structure of SabA from Helicobacter pylori
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-03-14 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 180.044, 180.044, 64.470 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 90.020 - 2.200 |
R-factor | 0.1409 |
Rwork | 0.140 |
R-free | 0.15939 |
Structure solution method | MAD |
RMSD bond length | 0.020 |
RMSD bond angle | 1.533 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | Auto-Rickshaw |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 90.030 | 90.030 | 2.320 |
High resolution limit [Å] | 2.200 | 6.960 | 2.200 |
Rmerge | 0.033 | 1.030 | |
Rpim | 0.012 | 0.357 | |
Number of reflections | 60966 | ||
<I/σ(I)> | 51.9 | 2.4 | |
Completeness [%] | 100.0 | 99 | 100 |
Redundancy | 9.3 | 8.8 | 9.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293.15 | 200mM sodium acetate, 18-20% PEG 4000, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293.15 | 200mM sodium acetate, 18-20% PEG 4000, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K |