4O3N
Crystal structure of human dna polymerase eta in ternary complex with native dna and incoming nucleotide (dcp)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-08-17 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.07810 |
Spacegroup name | P 61 |
Unit cell lengths | 98.662, 98.662, 81.787 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.242 - 1.579 |
R-factor | 0.1724 |
Rwork | 0.170 |
R-free | 0.21530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ecq |
RMSD bond length | 0.019 |
RMSD bond angle | 1.816 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER ((MR)) |
Refinement software | PHENIX ((phenix.refine: dev_1516)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.060 | 1.610 |
High resolution limit [Å] | 1.579 | 1.990 | 1.580 |
Rmerge | 0.065 | 0.158 | 0.900 |
Number of reflections | 61922 | ||
<I/σ(I)> | 37.397 | 15.607 | 2.204 |
Completeness [%] | 99.9 | 100 | 99.9 |
Redundancy | 7.4 | 7.4 | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 291 | 0.1M MES pH 5.5, 5mM magnesium chloride, 15.5% PEG 2000 MME, VAPOR DIFFUSION, HANGING DROP, temperature 291.0K |