4NYR
In-vivo crystallisation (midguts of a viviparous cockroach) and structure at 2.5 A resolution of a glycosylated, lipid-binding, lipocalin-like protein
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 70 |
Detector technology | PIXEL |
Collection date | 2013-05-13 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 2.7 |
Spacegroup name | P 1 |
格子定数 [Å] | 32.280, 33.220, 40.180 |
格子定数 [度] | 99.50, 100.28, 104.11 |
精密化法
分解能 | 38.580 - 2.490 |
R因子 | 0.16159 |
Rwork | 0.154 |
R-free | 0.23262 |
Structure solution method | SAD |
結合長の平均二乗偏差(RMSD) [Å] | 0.013 |
結合角の平均二乗偏差(RMSD) [度] | 1.906 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SOLVE |
Refinement software | REFMAC (5.7.0032) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 50.000 | 2.560 |
分解能 [Å] (高) | 2.490 | 2.490 |
独立反射数 | 5421 | |
<I/σ(I)> | 38.07 | 22.43 |
完全性 [%] | 99.6 | 96.7 |
冗長性 | 20 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | In-vivo crystallization | 6 | 300 | Spontaneous crystallization inside the midguts of a living viviparous cockroach, pH 6.0, In-vivo crystallization, temperature 300K |