4NYN
Crystal structure of RNase H1 from halophilic archaeon Halobacterium salinarum NRC-1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-10-10 |
Detector | BRUKER SMART 6500 |
Wavelength(s) | 0.9 |
Spacegroup name | I 41 |
Unit cell lengths | 115.802, 115.802, 38.282 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.940 - 1.410 |
R-factor | 0.1767 |
Rwork | 0.175 |
R-free | 0.20560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ehg |
RMSD bond length | 0.008 |
RMSD bond angle | 1.026 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.430 |
High resolution limit [Å] | 1.410 | 3.830 | 1.410 |
Rmerge | 0.074 | 0.044 | 0.381 |
Number of reflections | 48997 | ||
<I/σ(I)> | 6.6 | ||
Completeness [%] | 99.9 | 99.1 | 98.9 |
Redundancy | 7.4 | 7.1 | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 277 | 20%(W/V) PEG 8000, Imidazole(pH6.5), 3%(V/V) MPD, 10mM Manganese(II) chloride, VAPOR DIFFUSION, SITTING DROP, temperature 277K |