Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4NY6

Neutron structure of leucine and valine methyl protonated type III antifreeze

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.6525
Spacegroup nameP 21 21 21
Unit cell lengths32.730, 39.120, 46.540
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution26.772 - 1.850
R-factor0.1782
Rwork0.176
R-free0.22450
RMSD bond length0.013
RMSD bond angle1.302
Data reduction softwareLAUEGEN
Data scaling softwareLSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX ((phenix.refine: 1.8_1069))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.0001.9001.090
High resolution limit [Å]1.0501.8001.050
Rmerge0.0480.1690.638
Number of reflections28534
<I/σ(I)>32.56.62.66
Completeness [%]99.771.499.9
Redundancy6.13.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.228510mg/ml protein in 50 mM sodium acetate pD 5.2. Drops containing 20 ml protein solution and 30 ml precipitant buffer (2.1 M ammonium sulfate, 9% d8-glycerol) were equilibrated against 1 ml precipitant buffer in the reservoir, VAPOR DIFFUSION, SITTING DROP, temperature 285K
1VAPOR DIFFUSION, SITTING DROP5.228510mg/ml protein in 50 mM sodium acetate pD 5.2. Drops containing 20 ml protein solution and 30 ml precipitant buffer (2.1 M ammonium sulfate, 9% d8-glycerol) were equilibrated against 1 ml precipitant buffer in the reservoir, VAPOR DIFFUSION, SITTING DROP, temperature 285K

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon