4NY6
Neutron structure of leucine and valine methyl protonated type III antifreeze
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.6525 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 32.730, 39.120, 46.540 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 26.772 - 1.850 |
R-factor | 0.1782 |
Rwork | 0.176 |
R-free | 0.22450 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.302 |
Data reduction software | LAUEGEN |
Data scaling software | LSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX ((phenix.refine: 1.8_1069)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.900 | 1.090 |
High resolution limit [Å] | 1.050 | 1.800 | 1.050 |
Rmerge | 0.048 | 0.169 | 0.638 |
Number of reflections | 28534 | ||
<I/σ(I)> | 32.5 | 6.6 | 2.66 |
Completeness [%] | 99.7 | 71.4 | 99.9 |
Redundancy | 6.1 | 3.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.2 | 285 | 10mg/ml protein in 50 mM sodium acetate pD 5.2. Drops containing 20 ml protein solution and 30 ml precipitant buffer (2.1 M ammonium sulfate, 9% d8-glycerol) were equilibrated against 1 ml precipitant buffer in the reservoir, VAPOR DIFFUSION, SITTING DROP, temperature 285K |
1 | VAPOR DIFFUSION, SITTING DROP | 5.2 | 285 | 10mg/ml protein in 50 mM sodium acetate pD 5.2. Drops containing 20 ml protein solution and 30 ml precipitant buffer (2.1 M ammonium sulfate, 9% d8-glycerol) were equilibrated against 1 ml precipitant buffer in the reservoir, VAPOR DIFFUSION, SITTING DROP, temperature 285K |