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4NP8

Structure of an amyloid forming peptide VQIVYK from the second repeat region of tau (alternate polymorph)

Replaces:  3FQP
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyCCD
Collection date2008-02-25
DetectorADSC QUANTUM 315
Wavelength(s)0.9792
Spacegroup nameC 1 2 1
Unit cell lengths28.635, 4.880, 35.807
Unit cell angles90.00, 110.47, 90.00
Refinement procedure
Resolution16.780 - 1.510
R-factor0.1791
Rwork0.177
R-free0.19590
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2on9
RMSD bond length0.012
RMSD bond angle1.399
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]90.0001.620
High resolution limit [Å]1.5001.500
Rmerge0.1600.376
Number of reflections825
<I/σ(I)>8.14.7
Completeness [%]94.482.1
Redundancy4.14
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5298reservoir contained 14% iso-Propanol, 0.07M HEPES-Na pH 7.5, 0.14M Sodium Citrate, and 30% Glycerol, vapor diffusion, hanging drop, temperature 298K

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