4NOT
Crystal structure of Dioclea sclerocarpa lectin complexed with X-man
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE W01B-MX2 |
Synchrotron site | LNLS |
Beamline | W01B-MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-10-01 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.459 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 64.940, 66.610, 108.650 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.410 - 2.350 |
R-factor | 0.2115 |
Rwork | 0.209 |
R-free | 0.25650 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.021 |
RMSD bond angle | 1.927 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHASER (2.5.1) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 56.788 | 28.394 | 2.480 |
High resolution limit [Å] | 2.350 | 7.430 | 2.350 |
Rmerge | 0.085 | 0.052 | 0.205 |
Total number of observations | 1406 | 6800 | |
Number of reflections | 10134 | ||
<I/σ(I)> | 10.3 | 11.9 | 3.4 |
Completeness [%] | 99.8 | 94 | 100 |
Redundancy | 4.4 | 4.1 | 4.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 298 | 0.5 M Ammonium sulfate; 0.1 M Sodium citrate tribasic dihydrate; 1.3 M Lithium sulfate monohydrate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K |