Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4NOG

Crystal structure of a putative ornithine aminotransferase from Toxoplasma gondii ME49 in complex with pyrodoxal-5'-phosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2013-10-31
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.97872
Spacegroup nameP 1
Unit cell lengths56.190, 61.328, 63.678
Unit cell angles100.58, 93.23, 107.74
Refinement procedure
Resolution62.140 - 1.200
R-factor0.13481
Rwork0.133
R-free0.16494
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3lg0
RMSD bond length0.021
RMSD bond angle1.927
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0049)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]62.1401.220
High resolution limit [Å]1.2001.200
Rmerge0.0430.370
Number of reflections224574
<I/σ(I)>11.22
Completeness [%]91.091
Redundancy22
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.2 M Ammonium Acetate, 0.1 M Bis-Tris, 35% PEG3350, VAPOR DIFFUSION, SITTING DROP, temperature 293K

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon