4NOE
Crystal structure of DdrB bound to 30b ssDNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X25 |
Synchrotron site | NSLS |
Beamline | X25 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-06-11 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.1 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 131.760, 131.760, 102.280 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 65.880 - 2.200 |
R-factor | 0.1918 |
Rwork | 0.190 |
R-free | 0.23230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4hqb |
RMSD bond length | 0.011 |
RMSD bond angle | 1.247 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHENIX ((AutoMR)) |
Refinement software | PHENIX ((phenix.refine: 1.8.4_1496)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 80.790 | 2.320 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.116 | 0.813 |
Number of reflections | 46259 | |
<I/σ(I)> | 15 | 2.9 |
Completeness [%] | 100.0 | 99.9 |
Redundancy | 11.8 | 10.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 6% PEG2000, 0.1 M HEPES, pH 6.5, 0.05 M calcium chloride, 1 mM reduced L-glutathione, 1 mM oxidized L-glutathione, VAPOR DIFFUSION, HANGING DROP, temperature 293K |