4NOB
Crystal structure of the 1st Ig domain from mouse Polymeric Immunoglobulin receptor [PSI-NYSGRC-006220]
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X25 |
Synchrotron site | NSLS |
Beamline | X25 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-10-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0750 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 40.275, 46.803, 62.062 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.370 - 1.510 |
R-factor | 0.1625 |
Rwork | 0.161 |
R-free | 0.18910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1xed |
RMSD bond length | 0.023 |
RMSD bond angle | 2.214 |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.540 |
High resolution limit [Å] | 1.510 | 4.100 | 1.510 |
Rmerge | 0.077 | 0.068 | 0.353 |
Number of reflections | 18980 | ||
<I/σ(I)> | 8.1 | ||
Completeness [%] | 99.4 | 99.9 | 93.3 |
Redundancy | 11.9 | 11.5 | 8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 298 | Protein (20 mM Hepes, pH 7.5, 150 mM NaCl, 5% glycerol), Reservoir (0.2M MgCl2, 0.1M Bis-Tris-HCl, 25% (v/v) PEG 3350), Cryoprotection (33% Ethylene glycol), Vapor Diffusion, Sitting Drop, temperature 298K |