4NKT
Structure of Cid1 in complex with the UTP analog UMPNPP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-4 |
Synchrotron site | ESRF |
Beamline | ID14-4 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-06-04 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9394 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 53.770, 77.320, 82.110 |
Unit cell angles | 90.00, 90.86, 90.00 |
Refinement procedure
Resolution | 19.838 - 1.900 |
R-factor | 0.1801 |
Rwork | 0.179 |
R-free | 0.21250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ep7 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.082 |
Data reduction software | XDS (package) |
Data scaling software | XDS (package) |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8.1_1168)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.000 | |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.044 | 0.044 |
Number of reflections | 52778 | |
<I/σ(I)> | 27.41 | 11.19 |
Completeness [%] | 99.4 | 99.7 |
Redundancy | 5 | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.1 | 291 | 0.1 M imidazole/MES, pH 6.1, 20% glycerol, 10% PEG4000, 126 mM halogens (sodium iodide, sodium bromide, sodium fluoride), 10 mM TCEP, VAPOR DIFFUSION, SITTING DROP, temperature 291K |