4NH2
Crystal structure of AmtB from E. coli bound to phosphatidylglycerol
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-10-17 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.97949 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 116.190, 201.190, 232.450 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.740 - 2.300 |
R-factor | 0.2033 |
Rwork | 0.202 |
R-free | 0.23380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1u7g |
RMSD bond length | 0.016 |
RMSD bond angle | 1.670 |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.000 | 38.740 | 2.360 |
High resolution limit [Å] | 2.300 | 10.290 | 2.300 |
Rmerge | 0.124 | 0.011 | 1.204 |
Rmeas | 0.055 | 1.204 | |
Number of reflections | 119767 | 1455 | 8549 |
<I/σ(I)> | 13.66 | 35.95 | 2.48 |
Completeness [%] | 99.4 | 97.8 | 96.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 298 | 15% PEG 4000, 0.8M potassium formate, 0.1M sodium acetate pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K |