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4NGG

Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 13-mer siRNA having 5'-A and UU-3' ends (2.6 Angstrom resolution)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyCCD
Collection date2009-03-16
DetectorADSC QUANTUM 315
Wavelength(s)0.97949
Spacegroup nameI 2 2 2
Unit cell lengths85.897, 97.240, 106.766
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.421 - 2.600
R-factor0.1888
Rwork0.186
R-free0.23930
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ngd
RMSD bond length0.008
RMSD bond angle1.094
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.8.2_1309)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.690
High resolution limit [Å]2.6005.6002.600
Rmerge0.0880.0360.722
Number of reflections14296
<I/σ(I)>9.5
Completeness [%]99.999.3100
Redundancy9.78.99
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.42930.2 M sodium chloride, 0.1 M sodium/potassium phosphate, pH 6.0-6.4, 10% PEG8000, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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