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4NGC

Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 12-mer siRNA having UA-3' ends (2.1 Angstrom resolution)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyCCD
Collection date2009-06-16
DetectorADSC QUANTUM 315
Wavelength(s)0.97918
Spacegroup nameC 1 2 1
Unit cell lengths109.081, 84.482, 51.550
Unit cell angles90.00, 113.49, 90.00
Refinement procedure
Resolution34.179 - 2.104
R-factor0.1735
Rwork0.172
R-free0.20240
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ngd
RMSD bond length0.008
RMSD bond angle1.121
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.8.2_1309)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.180
High resolution limit [Å]2.1004.5202.100
Rmerge0.0650.0430.214
Number of reflections23726
<I/σ(I)>9.4
Completeness [%]95.299.175.8
Redundancy4.95.13.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72930.2 M sodium/potassium tartrate, 0.1 M Bis-Tris propane, pH 7.0, 18-22% PEG3350, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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