4N8G
Crystal structure of a TRAP periplasmic solute binding protein from Chromohalobacter salexigens DSM 3043 (Csal_0660), Target EFI-501075, with bound D-alanine-D-alanine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-10-10 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 65.536, 67.964, 276.012 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.869 - 1.502 |
R-factor | 0.1598 |
Rwork | 0.159 |
R-free | 0.18100 |
Structure solution method | SAD |
RMSD bond length | 0.009 |
RMSD bond angle | 1.234 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHELXS |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 138.006 | 100.000 | 1.530 |
High resolution limit [Å] | 1.502 | 4.070 | 1.502 |
Rmerge | 0.092 | 0.031 | 0.779 |
Number of reflections | 196106 | ||
<I/σ(I)> | 6.7 | ||
Completeness [%] | 99.4 | 97.6 | 100 |
Redundancy | 7.3 | 6.6 | 7.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 298 | 10 mg/mL protein in 10 mM HEPES, pH 7.5, 5 mM DTT, 10 mM D-Ala-D-Ala, reservoir: 0.2 M sodium chloride, 0.1 M acetate, pH 4.5, 1.26 M ammonium sulfate, cryoprotection: 4:1 2.0 M lithium sulfate:reservoir, VAPOR DIFFUSION, SITTING DROP, temperature 298K |