4N3A
Crystal Structure of human O-GlcNAc transferase bound to a peptide from HCF-1 pro-repeat 2 (1-26)E10A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-10-11 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.1 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 98.929, 98.929, 367.015 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.858 - 1.880 |
R-factor | 0.2015 |
Rwork | 0.200 |
R-free | 0.22220 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.062 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.7.3_928) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 85.675 | 45.858 | 1.980 |
High resolution limit [Å] | 1.880 | 5.950 | 1.880 |
Rmerge | 0.053 | 0.599 | |
Total number of observations | 22853 | 46145 | |
Number of reflections | 82602 | ||
<I/σ(I)> | 7.3 | 12.2 | 1.1 |
Completeness [%] | 95.0 | 93.6 | 96.1 |
Redundancy | 3.8 | 7.9 | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 0.72M Potassium Phosphate Monobasic, 0.88M Potassium Phosphate Dibasic, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K |