4MXR
Crystal structure of Trypanosoma cruzi formiminoglutamase with Mn2+2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2013-02-17 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | H 3 |
Unit cell lengths | 128.922, 128.922, 85.377 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 21.964 - 1.849 |
R-factor | 0.1882 |
Rwork | 0.186 |
R-free | 0.21690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2a0m |
RMSD bond length | 0.004 |
RMSD bond angle | 0.795 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER ((CCP4)) |
Refinement software | PHENIX ((phenix.refine: 1.5_2)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.920 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.059 | 0.438 |
Number of reflections | 44906 | |
<I/σ(I)> | 14.162 | 2.013 |
Completeness [%] | 99.2 | 98.8 |
Redundancy | 2.5 | 2.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.9 | 294 | A 4 UL drop of protein solution [10 mg/mL protein, 50 mM bicine (pH 8.5), 100 UM MnCl2, 1 mM TCEP] was mixed with a 4 UL drop of precipitant solution [31% PEG 300, 0.1 M sodium acetate (pH 4.9)] on a siliconized cover slide and equilibrated against a 500 UL reservoir of precipitant solution at 294K. The yielded crystal is apo. To obtain the Mn2+2 bound form, this apo-crystal was soaked with 5 mM MnCl2 in 0.1 M sodium malonate (pH 8.0), 27% PEG 3350) for 24 hours, VAPOR DIFFUSION, HANGING DROP |