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4MW2

Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor 1-(3-{[5-chloro-2-hydroxy-3-(prop-2-en-1-yl)benzyl]amino}propyl)-3-thiophen-3-ylurea (Chem 1472)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2011-06-19
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.98
Spacegroup nameP 21 21 21
Unit cell lengths87.712, 106.080, 206.275
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 2.300
R-factor0.2043
Rwork0.203
R-free0.23780
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4eg8
RMSD bond length0.007
RMSD bond angle1.165
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER (2.3.0)
Refinement softwareREFMAC (refmac_5.7.0032)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.340
High resolution limit [Å]2.3002.300
Rmerge0.1060.728
Number of reflections82816
<I/σ(I)>5.82
Completeness [%]96.388.7
Redundancy6.45.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2982.0-2.3 M ammonium sulfate, 0.2 M sodium chloride, 0.1 M sodium cacodylate, pH 6.0-6.8, VAPOR DIFFUSION, SITTING DROP, temperature 298K

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