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4MU4

The form B structure of an E21Q catalytic mutant of A. thaliana IGPD2 in complex with Mn2+ and its substrate, 2R3S-IGP, to 1.41 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2011-11-04
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9686
Spacegroup nameP 4 3 2
Unit cell lengths112.900, 112.900, 112.900
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution65.183 - 1.410
R-factor0.12495
Rwork0.123
R-free0.15360
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2f1d
RMSD bond length0.012
RMSD bond angle1.497
Data reduction softwareXDS ((XIA2))
Data scaling softwareXSCALE ((XIA2))
Phasing softwarePHASER
Refinement softwareREFMAC (5.7.0032)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]65.1831.450
High resolution limit [Å]1.4101.410
Rmerge0.0850.849
Number of reflections47547
<I/σ(I)>17.73.4
Completeness [%]100.0100
Redundancy10.510.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72900.05% PEG2000, 0.4 M succinic acid, pH 7.0, 0.1 M HEPES, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 290K

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