4MU0
The structure of wt A. thaliana IGPD2 in complex with Mn2+ and 1,2,4-triazole at 1.3 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2011-11-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9686 |
Spacegroup name | P 4 3 2 |
Unit cell lengths | 113.130, 113.130, 113.130 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.590 - 1.300 |
R-factor | 0.13049 |
Rwork | 0.130 |
R-free | 0.14806 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2f1d |
RMSD bond length | 0.011 |
RMSD bond angle | 1.525 |
Data reduction software | XDS ((XIA2)) |
Data scaling software | XSCALE ((XIA2)) |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.590 | 1.330 |
High resolution limit [Å] | 1.300 | 1.300 |
Rmerge | 0.053 | 0.762 |
Number of reflections | 61097 | |
<I/σ(I)> | 25.2 | 3.5 |
Completeness [%] | 100.0 | 99.9 |
Redundancy | 12.3 | 12.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9 | 290 | 30% PEG200, 0.1 M Tris, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 290K |