4MSJ
Crystal structure of S. pombe AMSH-like protease SST2 catalytic domain from P212121 space group
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2012-10-07 |
Detector | MAR scanner 300 mm plate |
Wavelength(s) | 1.033 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.799, 58.066, 187.500 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.310 - 1.800 |
R-factor | 0.2033 |
Rwork | 0.202 |
R-free | 0.23750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB CODE 4JXE |
RMSD bond length | 0.008 |
RMSD bond angle | 1.146 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((phenix.refine: 1.8.1_1168)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.830 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.087 | 0.628 |
Number of reflections | 55256 | |
<I/σ(I)> | 17.8 | 2.9 |
Completeness [%] | 97.9 | 96.6 |
Redundancy | 6 | 6.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 0.2 M ammonium phosphate dibasic, 20% w/v PEG 3350, 1.0 M glycine, pH 7.6, VAPOR DIFFUSION, SITTING DROP, temperature 293K |