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4MSB

RNA 10mer duplex with two 2'-5'-linkages

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.1
Synchrotron siteALS
Beamline8.2.1
Temperature [K]100
Detector technologyCCD
Collection date2012-04-30
DetectorADSC QUANTUM 315
Wavelength(s)1.0
Spacegroup nameC 1 2 1
Unit cell lengths96.150, 25.893, 69.722
Unit cell angles90.00, 112.61, 90.00
Refinement procedure
Resolution30.000 - 1.550
R-factor0.185
Rwork0.182
R-free0.24700
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle1.526
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASES
Refinement softwareREFMAC (5.6.0117)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.610
High resolution limit [Å]1.5501.550
Rmerge0.0390.039
Number of reflections22386
<I/σ(I)>36.23.4
Completeness [%]95.069
Redundancy5.92.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP629310% MPD (2-methyl-2,4-pentanediol), 40 mM sodium cacodylate pH 6.0, 12 mM spermine tetrahydrochloride, and 80 mM strontium (II) chloride, VAPOR DIFFUSION, HANGING DROP, temperature 293K
1VAPOR DIFFUSION, HANGING DROP629310% MPD (2-methyl-2,4-pentanediol), 40 mM sodium cacodylate pH 6.0, 12 mM spermine tetrahydrochloride, and 80 mM strontium (II) chloride, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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PDB entries from 2024-07-17

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