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4MS9

Native RNA-10mer Structure: ccggcgccgg

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.2
Synchrotron siteALS
Beamline8.2.2
Temperature [K]100
Detector technologyCCD
Collection date2013-01-10
DetectorADSC QUANTUM 315
Wavelength(s)1.0
Spacegroup nameP 31 2 1
Unit cell lengths22.708, 22.708, 77.721
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution25.910 - 1.320
R-factor0.19016
Rwork0.188
R-free0.22753
Structure solution methodAB INITIO PHASING
RMSD bond length0.015
RMSD bond angle1.706
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareACORN
Refinement softwareREFMAC (5.6.0117)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.370
High resolution limit [Å]1.3201.320
Rmerge0.0550.225
Number of reflections5742
<I/σ(I)>33.18.28
Completeness [%]96.084.7
Redundancy11.810.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP629310% MPD (2-methyl-2,4-pentanediol), 40 mM sodium cacodylate pH 6.0, 12 mM spermine tetrahydrochloride, and 80 mM strontium (II) chloride , VAPOR DIFFUSION, HANGING DROP, temperature 293K
1VAPOR DIFFUSION, HANGING DROP629310% MPD (2-methyl-2,4-pentanediol), 40 mM sodium cacodylate pH 6.0, 12 mM spermine tetrahydrochloride, and 80 mM strontium (II) chloride , VAPOR DIFFUSION, HANGING DROP, temperature 293K

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PDB entries from 2024-09-04

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