4MS9
Native RNA-10mer Structure: ccggcgccgg
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-01-10 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 22.708, 22.708, 77.721 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 25.910 - 1.320 |
R-factor | 0.19016 |
Rwork | 0.188 |
R-free | 0.22753 |
Structure solution method | AB INITIO PHASING |
RMSD bond length | 0.015 |
RMSD bond angle | 1.706 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | ACORN |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.370 |
High resolution limit [Å] | 1.320 | 1.320 |
Rmerge | 0.055 | 0.225 |
Number of reflections | 5742 | |
<I/σ(I)> | 33.1 | 8.28 |
Completeness [%] | 96.0 | 84.7 |
Redundancy | 11.8 | 10.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 10% MPD (2-methyl-2,4-pentanediol), 40 mM sodium cacodylate pH 6.0, 12 mM spermine tetrahydrochloride, and 80 mM strontium (II) chloride , VAPOR DIFFUSION, HANGING DROP, temperature 293K |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 10% MPD (2-methyl-2,4-pentanediol), 40 mM sodium cacodylate pH 6.0, 12 mM spermine tetrahydrochloride, and 80 mM strontium (II) chloride , VAPOR DIFFUSION, HANGING DROP, temperature 293K |