4MNC
Crystal structure of a TRAP periplasmic solute binding protein from Polaromonas sp. JS666 (Bpro_4736), Target EFI-510156, with bound benzoyl formate, space group P21
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-07-23 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 48.197, 58.480, 55.760 |
Unit cell angles | 90.00, 108.04, 90.00 |
Refinement procedure
Resolution | 33.915 - 1.050 |
R-factor | 0.1292 |
Rwork | 0.128 |
R-free | 0.14440 |
Structure solution method | SAD |
RMSD bond length | 0.007 |
RMSD bond angle | 1.208 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.20) |
Phasing software | HKL-3000 |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 53.019 | 58.480 | 1.110 |
High resolution limit [Å] | 1.050 | 3.320 | 1.050 |
Rmerge | 0.056 | 0.027 | 0.358 |
Total number of observations | 15599 | 33053 | |
Number of reflections | 130018 | ||
<I/σ(I)> | 13.3 | 11.4 | 2.2 |
Completeness [%] | 94.9 | 98.6 | 68.2 |
Redundancy | 3.4 | 3.5 | 2.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | 68.01 mg/mL protein in 10 mM HEPES, pH 7.5, 10 mM benzoyl formate, reservoir: MCSG1(E1) (2.0 M ammonium sulfate, 0.1 M HEPES, pH 7.5), cryoprotection: 4:1 2.0 M lithium sulfate:reservoir, VAPOR DIFFUSION, SITTING DROP, temperature 298K |