4MGN
Co-crystal structure of the G. kaustophilus glyQS T box riboswitch Stem I in complex with tRNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-03-07 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 92.838, 205.182, 161.421 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.292 - 3.200 |
R-factor | 0.2406 |
Rwork | 0.236 |
R-free | 0.27830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB ENTRIES 4JRC and 4MGM |
RMSD bond length | 0.001 |
RMSD bond angle | 0.458 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.260 |
High resolution limit [Å] | 3.200 | 8.670 | 3.200 |
Rmerge | 0.160 | 0.050 | |
Number of reflections | 26207 | ||
<I/σ(I)> | 4.2 | 56.78 | 2.29 |
Completeness [%] | 98.8 | 97.7 | 96.9 |
Redundancy | 6.9 | 7 | 6.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | hanging drop | 7 | 291 | 80mM NaCl, 20mM MgCl2, 40mM sodium cacodylate, 12mM spermine, 10% 2-methyl-1,3 propanediol, pH 7.0, hanging drop, temperature 291K |